$re = '/.*<MIR-\d+>.*<(?:EXP-V|ASSC-PHRASE)-\d+>.*<VACCVIRUS-PROP-\d+>.*/i';
$str = 'text <MIR-1> GGG-33 <EXP-V-3> text text <VACCVIRUS-PROP-1> some other.
text <MIR-1> text <ASSC-PHRASE-1> text <VACCVIRUS-PROP-1> some other <PATTERN-1> other.
';
preg_match_all($re, $str, $matches, PREG_SET_ORDER, 0);
// Print the entire match result
var_dump($matches);
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for PHP, please visit: http://php.net/manual/en/ref.pcre.php