import re
regex = re.compile(r"GC[AF]_\d+.\d", flags=re.MULTILINE)
test_str = ("GCA_000739415.1 PRJNA245225 SAMN02732406 na 837 837 Porphyromonas gingivalis strain=HG66 latest Chromosome Major Full 2014/08/14 ASM73941v1 University of Louisville GCF_000739415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/415/GCA_000739415.1_ASM73941v1 an\n\n"
"GCZ_000739415.1\n"
"GCA_00073093487509384675083764508346759415.1")
matches = regex.finditer(test_str)
for match_num, match in enumerate(matches, start=1):
print(f"Match {match_num} was found at {match.start()}-{match.end()}: {match.group()}")
for group_num, group in enumerate(match.groups(), start=1):
print(f"Group {group_num} found at {match.start(group_num)}-{match.end(group_num)}: {group}")
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for Python, please visit: https://docs.python.org/3/library/re.html