import Foundation
let pattern = #"((?=\w+)[\w|-]+.fa)"#
let regex = try! NSRegularExpression(pattern: pattern, options: .anchorsMatchLines)
let testString = #"""
chr5fa 153584000fa 15359999fas9 D160||||73_orphan_reads|||.fa;709[F18|R11] unkn 1 unkn 2509
chr7 153764000 153775999 D16073_orphan_reads.fa;710[F9fa|R21fa],14892_orphan_reads.fa;229[F19|R16] unkn 1 unkn 2510
chr3 127848000 127871999 B15971_orphan_reads.fa;172[F35|R6],D16157-14_orphan_reads.fa;183[F6|R13],14892_orphan_reads.fa;229[F19|R16],USP19283_orphan_reads.fa;336[F10|R6],D15927-14_orphan_reads.fa;176[F11|R10],1007,1007 46 1007 1658
(...)
"""#
let stringRange = NSRange(location: 0, length: testString.utf16.count)
let matches = regex.matches(in: testString, range: stringRange)
var result: [[String]] = []
for match in matches {
var groups: [String] = []
for rangeIndex in 1 ..< match.numberOfRanges {
let nsRange = match.range(at: rangeIndex)
guard !NSEqualRanges(nsRange, NSMakeRange(NSNotFound, 0)) else { continue }
let string = (testString as NSString).substring(with: nsRange)
groups.append(string)
}
if !groups.isEmpty {
result.append(groups)
}
}
print(result)
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for Swift 5.2, please visit: https://developer.apple.com/documentation/foundation/nsregularexpression