using System;
using System.Text.RegularExpressions;
public class Example
{
public static void Main()
{
string pattern = @"\t([^: ]{1,5}):([^: ]*):([^: ]*):([^: ]*):([^: ]*):([^: ]*):([^: \t]*)";
string input = @"1 13302 rs180734498 C T 564172 VQSRTrancheSNP99.60to99.80 BaseQRankSum=0.35;ClippingRankSum=0.062;DB;ExcessHet=0.0012;FS=5.483;InbreedingCoeff=0.0501;MQ=26.09;MQ0=0;MQRankSum=-3.805;QD=6.19;ReadPosRankSum=-1.494;SOR=1.191;VQSLOD=-0.9551;culprit=QD;DP=182805;AF=0.279;MLEAC=1817;MLEAF=0.279;AN=4308;AC=1464 GT:AD:DP:GQ:PGT:PID:PL ./.:0,0:0:0::.:. ./.:0,0:0:0:.:.:. ./.:0,0:0:0::.:. ./.:0,0:0:0:0,4,9:.:.";
RegexOptions options = RegexOptions.Multiline;
foreach (Match m in Regex.Matches(input, pattern, options))
{
Console.WriteLine("'{0}' found at index {1}.", m.Value, m.Index);
}
}
}
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for C#, please visit: https://msdn.microsoft.com/en-us/library/system.text.regularexpressions.regex(v=vs.110).aspx