$re = '/\/\*\s*<!\[CDATA\[[\s\S]*?\/\*\s*\]\]>\s*\*\//';
$str = '<script type="text/javascript">
/* <![CDATA[ */
var A=new Array();
..........................
..........................
/* ]]> */
</script>
some text2 ........................
some text3 ........................
some text4 ........................
<script type="text/javascript">
/* <![CDATA[ */
var B=new Array();
..........................
..........................
/* ]]> */
some text5 ........................';
$subst = "";
$result = preg_replace($re, $subst, $str);
echo "The result of the substitution is ".$result;
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for PHP, please visit: http://php.net/manual/en/ref.pcre.php