const regex = new RegExp('pow(\\([^)]+),2\\)', 'gm')
const str = `pow(alpha,2) + pow(beta,2)
(3*pow(betaR_red,2))
2/pow(gammaBlue,3))
-pow(epsilon_gamma,2)+5`;
const subst = `square\1)`;
// The substituted value will be contained in the result variable
const result = str.replace(regex, subst);
console.log('Substitution result: ', result);
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for JavaScript, please visit: https://developer.mozilla.org/en/docs/Web/JavaScript/Guide/Regular_Expressions